If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 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'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 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'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ), 'gf_id' => 'HOM05D000507', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000507' ), 'data_identifier' => 'HOM05D000507', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000507', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31620' => 'bna', 'A02p23970' => 'bna', 'A03p01730' => 'bna', 'A03p33280' => 'bna', 'A05p38590' => 'bna', 'A08p33370' => 'bna', 'A10p31470' => 'bna', 'Aa31LG11G5490' => 'aar', 'Aa31LG1G3140' => 'aar', 'Aa31LG2G2140' => 'aar', 'Aa31LG3G3430' => 'aar', 'Aa31LG5G13980' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2095' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2108' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2118' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2121' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1494' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2212' => 'aag', 'Actinidia06705' => 'ach', 'Actinidia08789' => 'ach', 'Actinidia18580' => 'ach', 'Actinidia24518' => 'ach', 'Actinidia24634' => 'ach', 'Actinidia29330' => 'ach', 'Ah.02g120330' => 'amhyb', 'Ah.02g120370' => 'amhyb', 'Ah.03g147380' => 'amhyb', 'Ah.03g147390' => 'amhyb', 'Ah.04g163670' => 'amhyb', 'Ah.09g235130' => 'amhyb', 'AL1G22730' => 'aly', 'AL2G19390' => 'aly', 'AL2G19420' => 'aly', 'AL2G19480' => 'aly', 'AL3G13150' => 'aly', 'AL3G21990' => 'aly', 'AL3G22000' => 'aly', 'AL6G14260' => 'aly', 'AL6G14280' => 'aly', 'AL8G37980' => 'aly', 'Aqoxy116s008' => 'aox', 'Aqoxy1G03298' => 'aox', 'Aqoxy2G01374' => 'aox', 'Aqoxy4G02881' => 'aox', 'Aqoxy7G02884' => 'aox', 'arahy.Tifrunner.gnm1.ann1.6HU6DS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70PRJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8US839' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CNM5E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3VCX4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F34SP4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L13TAJ' => 'arhy', 'AT1G11600' => 'ath', 'AT1G64900' => 'ath', 'AT1G64930' => 'ath', 'AT1G64940' => 'ath', 'AT1G64950' => 'ath', 'AT2G12190' => 'ath', 'AT3G03470' => 'ath', 'AT3G10560' => 'ath', 'AT3G10570' => 'ath', 'AT5G04630' => 'ath', 'AT5G04660' => 'ath', 'AT5G61320' => 'ath', 'ATR0661G085' => 'atr', 'ATR0752G164' => 'atr', 'ATR0820G001' => 'atr', 'ATR0820G270' => 'atr', 'Atru.chr10.2175' => 'acertr', 'Atru.chr12.1825' => 'acertr', 'Atru.chr12.1827' => 'acertr', 'Atru.chr12.1828' => 'acertr', 'Atru.chr12.1832' => 'acertr', 'Atru.chr12.972' => 'acertr', 'Atru.chr8.1464' => 'acertr', 'AUR62003504' => 'cqu', 'AUR62005547' => 'cqu', 'AUR62007470' => 'cqu', 'AUR62012671' => 'cqu', 'AUR62015300' => 'cqu', 'AUR62015301' => 'cqu', 'AUR62017806' => 'cqu', 'AUR62017807' => 'cqu', 'AUR62017808' => 'cqu', 'AUR62021983' => 'cqu', 'AUR62024186' => 'cqu', 'AUR62039928' => 'cqu', 'BcaB01g05908' => 'bca', 'BcaB03g13246' => 'bca', 'BcaB04g19368' => 'bca', 'BcaB04g20451' => 'bca', 'BcaB05g23599' => 'bca', 'BcaB05g24070' => 'bca', 'BcaB08g37406' => 'bca', 'BcaC01g04401' => 'bca', 'BcaC03g16028' => 'bca', 'BcaC05g29448' => 'bca', 'BcaC06g32173' => 'bca', 'BcaC06g32174' => 'bca', 'BcaC06g32175' => 'bca', 'BcaC06g32176' => 'bca', 'BcaC07g38675' => 'bca', 'BcaC07g41770' => 'bca', 'BcaC09g49295' => 'bca', 'BcaNung05853' => 'bca', 'BcaNung06521' => 'bca', 'BcaNung06522' => 'bca', 'BcaNung06523' => 'bca', 'BolC1t04001H' => 'bol', 'BolC2t09798H' => 'bol', 'BolC3t12766H' => 'bol', 'BolC3t16318H' => 'bol', 'BolC5t34405H' => 'bol', 'BolC8t49111H' => 'bol', 'BolC8t52345H' => 'bol', 'BolC9t53792H' => 'bol', 'BolC9t55924H' => 'bol', 'BolC9t59960H' => 'bol', 'BraA01t03291Z' => 'bra', 'BraA02t07392Z' => 'bra', 'BraA03t09548Z' => 'bra', 'BraA03t12500Z' => 'bra', 'BraA05t22650Z' => 'bra', 'BraA08t35254Z' => 'bra', 'BraA09t41786Z' => 'bra', 'BraA10t45193Z' => 'bra', 'C01p40460' => 'bna', 'C02p37820' => 'bna', 'C03p02140' => 'bna', 'C03p40530' => 'bna', 'C05p57480' => 'bna', 'C08p14600' => 'bna', 'C08p14650' => 'bna', 'C08p14720' => 'bna', 'C08p14750' => 'bna', 'C08p48120' => 'bna', 'C09p72160' => 'bna', 'CAN.G1131.1' => 'can', 'CAN.G1131.3' => 'can', 'CAN.G1131.7' => 'can', 'CAN.G1131.8' => 'can', 'CAN.G1131.9' => 'can', 'CAN.G135.78' => 'can', 'CAN.G1550.14' => 'can', 'CAN.G1557.15' => 'can', 'CAN.G1861.1' => 'can', 'CAN.G290.16' => 'can', 'CAN.G303.81' => 'can', 'CAN.G303.83' => 'can', 'CAN.G303.84' => 'can', 'CAN.G569.23' => 'can', 'CAN.G919.43' => 'can', 'CANSAT11G1929' => 'cansat', 'CANSAT21G2392' => 'cansat', 'CANSAT56G3454' => 'cansat', 'CANSAT56G3984' => 'cansat', 'CANSAT78G1788' => 'cansat', 'CARHR011910' => 'chi', 'CARHR056310' => 'chi', 'CARHR057170' => 'chi', 'CARHR077480' => 'chi', 'CARHR085090' => 'chi', 'CARHR208640' => 'chi', 'CARHR208660' => 'chi', 'CARHR208880' => 'chi', 'CARHR275080' => 'chi', 'CARHR275700' => 'chi', 'Carub.0001s1124' => 'cru', 'Carub.0002s0993' => 'cru', 'Carub.0002s0998' => 'cru', 'Carub.0002s1005' => 'cru', 'Carub.0003s0261' => 'cru', 'Carub.0003s0980' => 'cru', 'Carub.0006s0355' => 'cru', 'Carub.0006s0356' => 'cru', 'Ca_00188_v3' => 'car', 'Ca_04614_v3' => 'car', 'Ca_10495_v3' => 'car', 'Ca_17515_v3' => 'car', 'Ca_21096_v3' => 'car', 'Ca_23341_v3' => 'car', 'Ca_25078_v3' => 'car', 'Ca_30204_v3' => 'car', 'Cc02_g06570' => 'ccan', 'Cc02_g10080' => 'ccan', 'Cc09_g01950' => 'ccan', 'Cc09_g05150' => 'ccan', 'Cc09_g05160' => 'ccan', 'CDE02G2850' => 'cde', 'CDE06G0342' => 'cde', 'CDE06G2102' => 'cde', 'CDE07G0166' => 'cde', 'CDE07G0360' => 'cde', 'CDE07G0434' => 'cde', 'CDE07G0931' => 'cde', 'CDE08G1190' => 'cde', 'Cfa000252' => 'cfa', 'Cfa008059' => 'cfa', 'Cfa008060' => 'cfa', 'Cfa011228' => 'cfa', 'Cfa011473' => 'cfa', 'Cfa015017' => 'cfa', 'Cfa016082' => 'cfa', 'Cfa016083' => 'cfa', 'Cfa016084' => 'cfa', 'Cfa016085' => 'cfa', 'Cfa016087' => 'cfa', 'Cfa016088' => 'cfa', 'Cfa016089' => 'cfa', 'Cfa016090' => 'cfa', 'Cfa016091' => 'cfa', 'Cfa016092' => 'cfa', 'Cfa016093' => 'cfa', 'Cfa016095' => 'cfa', 'Cfa016097' => 'cfa', 'Cfa016103' => 'cfa', 'Cfa018372' => 'cfa', 'Cfa019121' => 'cfa', 'Cfa027080' => 'cfa', 'Ciclev10003406m.g' => 'ccl', 'Ciclev10007096m.g' => 'ccl', 'Ciclev10011479m.g' => 'ccl', 'Ciclev10013806m.g' => 'ccl', 'Ciclev10014970m.g' => 'ccl', 'Ciclev10030087m.g' => 'ccl', 'Ciclev10031193m.g' => 'ccl', 'Ciclev10031236m.g' => 'ccl', 'Ciclev10031268m.g' => 'ccl', 'Ciclev10031272m.g' => 'ccl', 'Ciclev10031286m.g' => 'ccl', 'Ciclev10031693m.g' => 'ccl', 'Ciclev10033383m.g' => 'ccl', 'Ciclev10033803m.g' => 'ccl', 'Ciclev10033851m.g' => 'ccl', 'CiPaw.05G211400' => 'cil', 'CiPaw.05G211500' => 'cil', 'CiPaw.05G211600' => 'cil', 'CiPaw.05G211700' => 'cil', 'CiPaw.05G211900' => 'cil', 'CiPaw.05G212000' => 'cil', 'CiPaw.06G036500' => 'cil', 'CiPaw.06G036600' => 'cil', 'CiPaw.06G036700' => 'cil', 'CiPaw.09G089200' => 'cil', 'CiPaw.13G036500' => 'cil', 'ClCG01G000720' => 'cla', 'ClCG01G022100' => 'cla', 'ClCG02G007740' => 'cla', 'ClCG05G021600' => 'cla', 'ClCG06G001580' => 'cla', 'ClCG08G008110' => 'cla', 'ClCG09G016830' => 'cla', 'ClCG09G016840' => 'cla', 'ClCG09G016850' => 'cla', 'COL.COLO4_07064' => 'col', 'COL.COLO4_08901' => 'col', 'COL.COLO4_12223' => 'col', 'COL.COLO4_12967' => 'col', 'COL.COLO4_21338' => 'col', 'COL.COLO4_31741' => 'col', 'COL.COLO4_32814' => 'col', 'COL.COLO4_32815' => 'col', 'COL.COLO4_32816' => 'col', 'COL.COLO4_32817' => 'col', 'COL.COLO4_32825' => 'col', 'COL.COLO4_33904' => 'col', 'Cpa.g.sc128.44' => 'cpa', 'Cpa.g.sc198.23' => 'cpa', 'Cpa.g.sc43.149' => 'cpa', 'CsaV3_2G035960' => 'csa', 'CsaV3_2G036280' => 'csa', 'CsaV3_2G036290' => 'csa', 'CsaV3_2G036300' => 'csa', 'CsaV3_2G036310' => 'csa', 'CsaV3_2G036320' => 'csa', 'CsaV3_2G036340' => 'csa', 'CsaV3_2G036360' => 'csa', 'CsaV3_5G000850' => 'csa', 'CsaV3_5G035630' => 'csa', 'CsaV3_6G004090' => 'csa', 'CsaV3_6G007550' => 'csa', 'CsaV3_6G049160' => 'csa', 'CSS0002756' => 'camsi', 'CSS0004195' => 'camsi', 'CSS0018227' => 'camsi', 'CSS0027183' => 'camsi', 'CSS0028162' => 'camsi', 'CSS0030825' => 'camsi', 'CSS0031915' => 'camsi', 'CSS0036529' => 'camsi', 'CSS0042732' => 'camsi', 'DCAR_006356' => 'dca', 'DCAR_006362' => 'dca', 'DCAR_006366' => 'dca', 'DCAR_006370' => 'dca', 'DCAR_019013' => 'dca', 'DCAR_020433' => 'dca', 'DCAR_020434' => 'dca', 'DCAR_024941' => 'dca', 'DCAR_029236' => 'dca', 'DCAR_029237' => 'dca', 'Dinv17241' => 'din', 'Dinv17819' => 'din', 'Dinv30652' => 'din', 'Duzib106G0457' => 'dzi', 'Duzib106G0501' => 'dzi', 'Duzib106G1863' => 'dzi', 'Duzib114G0924' => 'dzi', 'Duzib128G0175' => 'dzi', 'Duzib128G0742' => 'dzi', 'Duzib128G1319' => 'dzi', 'Duzib128G1695' => 'dzi', 'Duzib160G0393' => 'dzi', 'Duzib177G0110' => 'dzi', 'Duzib177G0251' => 'dzi', 'Duzib177G0306' => 'dzi', 'Duzib177G0311' => 'dzi', 'Duzib235G0044' => 'dzi', 'ECA232G4078' => 'eca', 'ECA233G5500' => 'eca', 'ECA234G2214' => 'eca', 'ECA234G2953' => 'eca', 'ECA234G3850' => 'eca', 'ECA234G3905' => 'eca', 'ECA234G4623' => 'eca', 'ECA234G4649' => 'eca', 'ECA238G3702' => 'eca', 'ECA246G3138' => 'eca', 'EL10Ac3g05928' => 'bvu', 'EL10Ac4g08674' => 'bvu', 'EL10Ac6g14879' => 'bvu', 'EL10Ac6g14880' => 'bvu', 'EL10Ac6g14881' => 'bvu', 'EL10Ac6g14882' => 'bvu', 'EL10Ac6g15376' => 'bvu', 'EL10Ac6g15377' => 'bvu', 'EL10Ac6g15378' => 'bvu', 'EL10Ac8g20018' => 'bvu', 'Eucgr.D01302' => 'egr', 'Eucgr.H01119' => 'egr', 'Eucgr.H01121' => 'egr', 'Eucgr.H01122' => 'egr', 'Eucgr.H01123' => 'egr', 'Eucgr.H01124' => 'egr', 'Eucgr.H01125' => 'egr', 'Eucgr.H01126' => 'egr', 'Eucgr.H01127' => 'egr', 'Eucgr.H01128' => 'egr', 'Eucgr.H01130' => 'egr', 'Eucgr.H01131' => 'egr', 'Eucgr.H01133' => 'egr', 'Eucgr.H01134' => 'egr', 'Eucgr.H01137' => 'egr', 'Eucgr.H01138' => 'egr', 'Eucgr.H01140' => 'egr', 'Eucgr.H01142' => 'egr', 'Eucgr.H01143' => 'egr', 'Eucgr.H01144' => 'egr', 'Eucgr.H01145' => 'egr', 'Eucgr.H01146' => 'egr', 'Eucgr.H01148' => 'egr', 'Eucgr.J01011' => 'egr', 'Eucgr.L01182' => 'egr', 'Eucgr.L01185' => 'egr', 'Eucgr.L01186' => 'egr', 'Eucgr.L01189' => 'egr', 'Eucgr.L02518' => 'egr', 'Eucgr.L02519' => 'egr', 'Eucgr.L03497' => 'egr', 'FAN01G0159' => 'fan', 'FAN01G0696' => 'fan', 'FAN01G1608' => 'fan', 'FAN01G2461' => 'fan', 'FAN01G2664' => 'fan', 'FAN01G3119' => 'fan', 'FAN02G2691' => 'fan', 'FAN02G3573' => 'fan', 'FAN02G3967' => 'fan', 'FAN03G0386' => 'fan', 'FAN03G1425' => 'fan', 'FAN03G1756' => 'fan', 'FAN03G2332' => 'fan', 'FAN03G2478' => 'fan', 'FAN03G3308' => 'fan', 'FAN03G3463' => 'fan', 'FAN04G1329' => 'fan', 'FAN04G1887' => 'fan', 'FAN04G3132' => 'fan', 'FAN05G3067' => 'fan', 'FAN06G0912' => 'fan', 'FAN06G1769' => 'fan', 'FAN06G1960' => 'fan', 'FAN06G3035' => 'fan', 'FAN06G3238' => 'fan', 'FAN06G4358' => 'fan', 'FAN08G0496' => 'fan', 'FAN09G0222' => 'fan', 'FAN10G1018' => 'fan', 'FAN10G1045' => 'fan', 'FAN10G1739' => 'fan', 'FAN10G2868' => 'fan', 'FAN10G3795' => 'fan', 'FAN10G3832' => 'fan', 'FAN11G3076' => 'fan', 'FAN12G0206' => 'fan', 'FAN12G4211' => 'fan', 'FAN13G2730' => 'fan', 'FAN14G1302' => 'fan', 'FAN14G5062' => 'fan', 'FAN16G3509' => 'fan', 'FAN21G1731' => 'fan', 'FAN25G3479' => 'fan', 'FvH4_3g26910' => 'fve', 'FvH4_4g17150' => 'fve', 'FvH4_5g25581' => 'fve', 'FvH4_6g28770' => 'fve', 'FvH4_6g29060' => 'fve', 'FvH4_7g05960' => 'fve', 'FvH4_7g21810' => 'fve', 'FvH4_7g29661' => 'fve', 'FvH4_7g29700' => 'fve', 'FvH4_7g29720' => 'fve', 'FvH4_7g29721' => 'fve', 'FvH4_7g29740' => 'fve', 'Glyma.07G220300' => 'gma', 'Glyma.07G220400' => 'gma', 'Glyma.07G220500' => 'gma', 'Glyma.07G258800' => 'gma', 'Glyma.09G215600' => 'gma', 'Glyma.10G202400' => 'gma', 'Glyma.12G013700' => 'gma', 'Glyma.17G015400' => 'gma', 'Glyma.20G018600' => 'gma', 'Glyma.20G018800' => 'gma', 'Glyma.20G018900' => 'gma', 'Glyma.20G188000' => 'gma', 'Gohir.A02G114800' => 'ghi', 'Gohir.A06G147100' => 'ghi', 'Gohir.A06G208101' => 'ghi', 'Gohir.A08G221636' => 'ghi', 'Gohir.A10G014200' => 'ghi', 'Gohir.A10G197700' => 'ghi', 'Gohir.A11G302300' => 'ghi', 'Gohir.A11G302400' => 'ghi', 'Gohir.A11G302500' => 'ghi', 'Gohir.A12G078100' => 'ghi', 'Gohir.A13G092300' => 'ghi', 'Gohir.D03G050150' => 'ghi', 'Gohir.D03G055800' => 'ghi', 'Gohir.D06G152900' => 'ghi', 'Gohir.D06G213400' => 'ghi', 'Gohir.D08G240000' => 'ghi', 'Gohir.D10G014200' => 'ghi', 'Gohir.D10G204800' => 'ghi', 'Gohir.D11G317900' => 'ghi', 'Gohir.D11G318000' => 'ghi', 'Gohir.D11G318100' => 'ghi', 'Gohir.D12G091200' => 'ghi', 'Gohir.D13G091200' => 'ghi', 'Gohir.D13G091301' => 'ghi', 'Gorai.003G051700' => 'gra', 'Gorai.003G058600' => 'gra', 'Gorai.004G255300' => 'gra', 'Gorai.007G347700' => 'gra', 'Gorai.007G347800' => 'gra', 'Gorai.007G347900' => 'gra', 'Gorai.008G098700' => 'gra', 'Gorai.010G178900' => 'gra', 'Gorai.010G252700' => 'gra', 'Gorai.011G016000' => 'gra', 'Gorai.011G229800' => 'gra', 'Gorai.013G103400' => 'gra', 'Gorai.013G103500' => 'gra', 'GSVIVG01012652001' => 'vvi', 'GSVIVG01023560001' => 'vvi', 'GSVIVG01023562001' => 'vvi', 'GSVIVG01024267001' => 'vvi', 'GSVIVG01024270001' => 'vvi', 'GSVIVG01024274001' => 'vvi', 'GSVIVG01024276001' => 'vvi', 'GSVIVG01024278001' => 'vvi', 'GSVIVG01024279001' => 'vvi', 'GSVIVG01024280001' => 'vvi', 'GSVIVG01024281001' => 'vvi', 'GSVIVG01024289001' => 'vvi', 'GSVIVG01034704001' => 'vvi', 'GSVIVG01036779001' => 'vvi', 'HanXRQChr05g0147031' => 'han', 'HanXRQChr12g0375921' => 'han', 'HanXRQChr16g0515591' => 'han', 'HanXRQChr16g0527091' => 'han', 'HanXRQChr16g0527101' => 'han', 'HanXRQChr16g0527111' => 'han', 'HanXRQChr16g0527131' => 'han', 'HanXRQChr16g0527141' => 'han', 'HanXRQChr16g0527151' => 'han', 'HanXRQChr16g0527161' => 'han', 'HanXRQChr17g0566441' => 'han', 'HanXRQChr17g0566451' => 'han', 'Haze_00355' => 'cav', 'Haze_00356' => 'cav', 'Haze_00357' => 'cav', 'Haze_00358' => 'cav', 'Haze_00361' => 'cav', 'Haze_02600' => 'cav', 'Haze_06772' => 'cav', 'Haze_08412' => 'cav', 'Haze_13969' => 'cav', 'Haze_13972' => 'cav', 'Haze_24059' => 'cav', 'Haze_25039' => 'cav', 'Haze_25040' => 'cav', 'Hma1.2p1_0352F.1_g133060' => 'hma', 'Hma1.2p1_0419F.1_g149560' => 'hma', 'Hma1.2p1_0813F.1_g222570' => 'hma', 'HPP92_002523' => 'vpl', 'HPP92_002524' => 'vpl', 'HPP92_008903' => 'vpl', 'HPP92_008904' => 'vpl', 'HPP92_008906' => 'vpl', 'HPP92_012891' => 'vpl', 'HPP92_016318' => 'vpl', 'HPP92_023004' => 'vpl', 'Hund21390' => 'sun', 'Lalb_Chr01g0020761' => 'lal', 'Lalb_Chr01g0020771' => 'lal', 'Lalb_Chr02g0151391' => 'lal', 'Lalb_Chr03g0024301' => 'lal', 'Lalb_Chr03g0036361' => 'lal', 'Lalb_Chr03g0037691' => 'lal', 'Lalb_Chr03g0037701' => 'lal', 'Lalb_Chr03g0037711' => 'lal', 'Lalb_Chr03g0037721' => 'lal', 'Lalb_Chr03g0037731' => 'lal', 'Lalb_Chr03g0037751' => 'lal', 'Lalb_Chr03g0037761' => 'lal', 'Lalb_Chr03g0037771' => 'lal', 'Lalb_Chr03g0037781' => 'lal', 'Lalb_Chr03g0037801' => 'lal', 'Lalb_Chr03g0037811' => 'lal', 'Lalb_Chr03g0037821' => 'lal', 'Lalb_Chr03g0037831' => 'lal', 'Lalb_Chr09g0325161' => 'lal', 'Lalb_Chr12g0196121' => 'lal', 'Lalb_Chr21g0313241' => 'lal', 'Lj1g0019710' => 'lja', 'Lj1g0026718' => 'lja', 'Lj1P1227T74' => 'lonja', 'Lj2C27T15' => 'lonja', 'Lj2g0027055' => 'lja', 'Lj3A931T45' => 'lonja', 'Lj3C883G6' => 'lonja', 'Lj3g0013348' => 'lja', 'Lj4g0017721' => 'lja', 'Lj5g0025187' => 'lja', 'Lj9C4T3' => 'lonja', 'Lj9C4T4' => 'lonja', 'Lju114C1T0' => 'lonja', 'Lju114C4T1' => 'lonja', 'Lju114C4T3' => 'lonja', 'Lju114C7T2' => 'lonja', 'Lju114C7T3' => 'lonja', 'Lju1220C7T0' => 'lonja', 'Lju1609C2T3' => 'lonja', 'Lju170A27T21' => 'lonja', 'Lju170C27T1' => 'lonja', 'Lju170C27T2' => 'lonja', 'Lju225C7T12' => 'lonja', 'Lju225C7T13' => 'lonja', 'Lju225C7T3' => 'lonja', 'Lsat_1_v5_gn_0_16841' => 'lsa', 'Lsat_1_v5_gn_2_102421' => 'lsa', 'Lsat_1_v5_gn_2_43440' => 'lsa', 'Lsat_1_v5_gn_3_85280' => 'lsa', 'Lsat_1_v5_gn_4_124421' => 'lsa', 'Lsat_1_v5_gn_4_25161' => 'lsa', 'Lsat_1_v5_gn_4_25281' => 'lsa', 'Lsat_1_v5_gn_4_25301' => 'lsa', 'Lsat_1_v5_gn_4_25341' => 'lsa', 'Lsat_1_v5_gn_4_25441' => 'lsa', 'Lsat_1_v5_gn_4_25481' => 'lsa', 'Lsat_1_v5_gn_4_60120' => 'lsa', 'Lsat_1_v5_gn_8_38940' => 'lsa', 'Manes.07G091600' => 'mes', 'Manes.07G112202' => 'mes', 'Manes.08G159700' => 'mes', 'Manes.08G159750' => 'mes', 'Manes.08G159800' => 'mes', 'Manes.08G159900' => 'mes', 'Manes.09G130200' => 'mes', 'Manes.13G121150' => 'mes', 'Manes.16G010300' => 'mes', 'Manes.17G005000' => 'mes', 'Manes.17G036900' => 'mes', 'Mapoly0038s0036' => 'mpo', 'Mapoly0038s0052' => 'mpo', 'Mapoly0057s0084' => 'mpo', 'Mapoly0132s0024' => 'mpo', 'MBI01_g03735_MAGBIO' => 'mbi', 'MBI02_g03000_MAGBIO' => 'mbi', 'MBI04_g26977_MAGBIO' => 'mbi', 'MBI04_g31952_MAGBIO' => 'mbi', 'MBI04_g31954_MAGBIO' => 'mbi', 'MBI04_g46057_MAGBIO' => 'mbi', 'MBI12_g02090_MAGBIO' => 'mbi', 'MBI12_g02091_MAGBIO' => 'mbi', 'MBI12_g15034_MAGBIO' => 'mbi', 'MBI14_g23351_MAGBIO' => 'mbi', 'MBI17_g19806_MAGBIO' => 'mbi', 'MBI17_g20161_MAGBIO' => 'mbi', 'MBI17_g45760_MAGBIO' => 'mbi', 'MBI18_g06566_MAGBIO' => 'mbi', 'MBI18_g33366_MAGBIO' => 'mbi', 'MBI19_g41378_MAGBIO' => 'mbi', 'MD01G1175700' => 'mdo', 'MD01G1203700' => 'mdo', 'MD01G1203800' => 'mdo', 'MD01G1203900' => 'mdo', 'MD01G1204000' => 'mdo', 'MD01G1204300' => 'mdo', 'MD01G1204400' => 'mdo', 'MD01G1204500' => 'mdo', 'MD02G1247800' => 'mdo', 'MD07G1068700' => 'mdo', 'MD07G1246400' => 'mdo', 'MD07G1273000' => 'mdo', 'Medtr1g492820' => 'mtr', 'Medtr2g010250' => 'mtr', 'Medtr2g010280' => 'mtr', 'Medtr2g010290' => 'mtr', 'Medtr2g010300' => 'mtr', 'Medtr2g010320' => 'mtr', 'Medtr2g010330' => 'mtr', 'Medtr2g010380' => 'mtr', 'Medtr4g131830' => 'mtr', 'Medtr5g026520' => 'mtr', 'Medtr5g034900' => 'mtr', 'Medtr8g063260' => 'mtr', 'Medtr8g063280' => 'mtr', 'Medtr8g098565' => 'mtr', 'MELO3C005857.2' => 'cme', 'MELO3C007379.2' => 'cme', 'MELO3C011736.2' => 'cme', 'MELO3C012364.2' => 'cme', 'MELO3C012552.2' => 'cme', 'MELO3C019607.2' => 'cme', 'MELO3C019884.2' => 'cme', 'MELO3C021842.2' => 'cme', 'MELO3C021843.2' => 'cme', 'MELO3C021844.2' => 'cme', 'MELO3C021845.2' => 'cme', 'MELO3C021846.2' => 'cme', 'MELO3C021849.2' => 'cme', 'MELO3C021850.2' => 'cme', 'MELO3C021851.2' => 'cme', 'MELO3C022376.2' => 'cme', 'MELO3C023356.2' => 'cme', 'MELO3C024745.2' => 'cme', 'MELO3C024852.2' => 'cme', 'MELO3C028859.2' => 'cme', 'MELO3C030386.2' => 'cme', 'MELO3C030404.2' => 'cme', 'MELO3C030658.2' => 'cme', 'MELO3C030694.2' => 'cme', 'MELO3C031106.2' => 'cme', 'MELO3C031720.2' => 'cme', 'MELO3C032391.2' => 'cme', 'MELO3C032414.2' => 'cme', 'MELO3C032415.2' => 'cme', 'MELO3C033675.2' => 'cme', 'MELO3C034676.2' => 'cme', 'MELO3C034700.2' => 'cme', 'MELO3C034869.2' => 'cme', 'MELO3C034890.2' => 'cme', 'MELO3C034930.2' => 'cme', 'Migut.F00928' => 'egut', 'Migut.F01655' => 'egut', 'Migut.H01559' => 'egut', 'MSTRG.414' => 'ama', 'Nitab4.5_0000096g0120' => 'nta', 'Nitab4.5_0000234g0260' => 'nta', 'Nitab4.5_0000426g0070' => 'nta', 'Nitab4.5_0000617g0030' => 'nta', 'Nitab4.5_0000760g0050' => 'nta', 'Nitab4.5_0000760g0060' => 'nta', 'Nitab4.5_0001807g0010' => 'nta', 'Nitab4.5_0001807g0020' => 'nta', 'Nitab4.5_0002259g0020' => 'nta', 'Nitab4.5_0002259g0030' => 'nta', 'Nitab4.5_0002655g0050' => 'nta', 'Nitab4.5_0002655g0060' => 'nta', 'Nitab4.5_0002655g0070' => 'nta', 'Nitab4.5_0002706g0050' => 'nta', 'Nitab4.5_0003376g0080' => 'nta', 'Nitab4.5_0003468g0020' => 'nta', 'Nitab4.5_0005472g0090' => 'nta', 'Nitab4.5_0007174g0020' => 'nta', 'Nitab4.5_0007922g0030' => 'nta', 'Nitab4.5_0013249g0010' => 'nta', 'Nn1g02086' => 'nnu', 'Nn1g03589' => 'nnu', 'Nn1g09195' => 'nnu', 'Nn1g09198' => 'nnu', 'Nn1g09199' => 'nnu', 'Nn1g09201' => 'nnu', 'Nn1g09211' => 'nnu', 'Nn2g13301' => 'nnu', 'Nn2g14034' => 'nnu', 'Nn2g15000' => 'nnu', 'Nn2g15004' => 'nnu', 'Nn2g15026' => 'nnu', 'Nn2g15027' => 'nnu', 'Nn3g19203' => 'nnu', 'Nn3g19204' => 'nnu', 'Nn3g19206' => 'nnu', 'Nn3g19207' => 'nnu', 'Nn5g30014' => 'nnu', 'Nn6g35029' => 'nnu', 'Nn8g39135' => 'nnu', 'Nn8g39136' => 'nnu', 'Nn8g39137' => 'nnu', 'Oeu015736.1' => 'oeu', 'Oeu027976.1' => 'oeu', 'Oeu034409.1' => 'oeu', 'Oeu034410.1' => 'oeu', 'Oeu034411.1' => 'oeu', 'Oeu034412.1' => 'oeu', 'Oeu060260.1' => 'oeu', 'Os02g0108800' => 'osa', 'Os04g0128001' => 'osa', 'Os04g0128400' => 'osa', 'Os04g0407900' => 'osa', 'Os06g0328900' => 'osa', 'Os06g0632300' => 'osa', 'Os06g0680700' => 'osa', 'Os07g0451300' => 'osa', 'Os08g0152300' => 'osa', 'Os08g0152400' => 'osa', 'Os10g0139700' => 'osa', 'Os10g0511200' => 'osa', 'Os10g0513400' => 'osa', 'Os10g0513900' => 'osa', 'Os10g0514300' => 'osa', 'Os10g0514450' => 'osa', 'Os10g0514500' => 'osa', 'Os10g0514700' => 'osa', 'Os10g0514901' => 'osa', 'Os10g0515200' => 'osa', 'Os10g0515400' => 'osa', 'Os10g0515900' => 'osa', 'Peaxi162Scf00002g00004' => 'pax', 'Peaxi162Scf00004g00019' => 'pax', 'Peaxi162Scf00060g00436' => 'pax', 'Peaxi162Scf00091g00720' => 'pax', 'Peaxi162Scf00154g00926' => 'pax', 'Peaxi162Scf00244g00062' => 'pax', 'Peaxi162Scf00262g00044' => 'pax', 'Peaxi162Scf00720g00419' => 'pax', 'Peaxi162Scf00720g00420' => 'pax', 'PGR004G0923' => 'pgr', 'PGR042G2041' => 'pgr', 'PGR044G1824' => 'pgr', 'PGR119G0601' => 'pgr', 'PGR119G0767' => 'pgr', 'PGR119G1576' => 'pgr', 'PGR119G1613' => 'pgr', 'PGR119G1983' => 'pgr', 'PGR119G2236' => 'pgr', 'PGSC0003DMG400000534' => 'stu', 'PGSC0003DMG400000564' => 'stu', 'PGSC0003DMG400000565' => 'stu', 'PGSC0003DMG400002078' => 'stu', 'PGSC0003DMG400003140' => 'stu', 'PGSC0003DMG400003141' => 'stu', 'PGSC0003DMG400005925' => 'stu', 'PGSC0003DMG400005926' => 'stu', 'PGSC0003DMG400023382' => 'stu', 'PGSC0003DMG400027340' => 'stu', 'PGSC0003DMG400027741' => 'stu', 'PGSC0003DMG400027756' => 'stu', 'PGSC0003DMG400036058' => 'stu', 'PGSC0003DMG401003142' => 'stu', 'Phvul.002G097000' => 'pvu', 'Phvul.002G097100' => 'pvu', 'Phvul.002G125200' => 'pvu', 'Phvul.003G076900' => 'pvu', 'Phvul.007G104800' => 'pvu', 'Phvul.011G016700' => 'pvu', 'Potri.001G330501' => 'ptr', 'Potri.003G104600' => 'ptr', 'Potri.004G018800' => 'ptr', 'Potri.004G019000' => 'ptr', 'Potri.005G079600' => 'ptr', 'Potri.007G087950' => 'ptr', 'Potri.007G088018' => 'ptr', 'Potri.007G088086' => 'ptr', 'Potri.007G088154' => 'ptr', 'Potri.008G025500' => 'ptr', 'Potri.008G099100' => 'ptr', 'Potri.013G076600' => 'ptr', 'Potri.013G076700' => 'ptr', 'Potri.015G006100' => 'ptr', 'Pp3c18_21260' => 'ppa', 'Pp3c9_20580' => 'ppa', 'Prupe.2G086300' => 'ppe', 'Prupe.2G296300' => 'ppe', 'Prupe.2G296400' => 'ppe', 'Prupe.2G296500' => 'ppe', 'Prupe.2G296600' => 'ppe', 'Prupe.5G017500' => 'ppe', 'Prupe.7G219700' => 'ppe', 'Psat0ss1902g0080' => 'psa', 'Psat1g212440' => 'psa', 'Psat2g103280' => 'psa', 'Psat2g143400' => 'psa', 'Psat4g007720' => 'psa', 'Psat6g176600' => 'psa', 'Psat7g031280' => 'psa', 'PSO017G0784' => 'pso', 'PSO017G3047' => 'pso', 'PSO063G4498' => 'pso', 'PSO063G6070' => 'pso', 'PSO104G0225' => 'pso', 'PSO339G3437' => 'pso', 'PSO384G0207' => 'pso', 'PSO384G1763' => 'pso', 'PSO421G0550' => 'pso', 'PSO423G0290' => 'pso', 'PSO443G0012' => 'pso', 'PSO478G0857' => 'pso', 'PSO541G4676' => 'pso', 'PSO675G2030' => 'pso', 'PSO675G7330' => 'pso', 'PSO732G0196' => 'pso', 'PSO832G0702' => 'pso', 'PSO832G1607' => 'pso', 'QL03p064767' => 'qlo', 'QL04p041297' => 'qlo', 'QL04p041340' => 'qlo', 'QL05p074116' => 'qlo', 'QL05p074118' => 'qlo', 'QL09p020352' => 'qlo', 'QL09p020358' => 'qlo', 'QL09p020366' => 'qlo', 'QL09p020410' => 'qlo', 'QL09p020473' => 'qlo', 'QL09p020491' => 'qlo', 'RcHm_v2.0_Chr1g0333181' => 'rch', 'RcHm_v2.0_Chr1g0377691' => 'rch', 'RcHm_v2.0_Chr1g0377701' => 'rch', 'RcHm_v2.0_Chr1g0377721' => 'rch', 'RcHm_v2.0_Chr1g0377731' => 'rch', 'RcHm_v2.0_Chr2g0133181' => 'rch', 'RcHm_v2.0_Chr2g0133931' => 'rch', 'RcHm_v2.0_Chr2g0134061' => 'rch', 'RcHm_v2.0_Chr2g0134091' => 'rch', 'RcHm_v2.0_Chr2g0134201' => 'rch', 'RcHm_v2.0_Chr5g0035991' => 'rch', 'RcHm_v2.0_Chr7g0221591' => 'rch', 'RcHm_v2.0_Chr7g0221601' => 'rch', 'Rhsim02G0110800' => 'rsi', 'Rhsim03G0105900' => 'rsi', 'Rhsim03G0224800' => 'rsi', 'Rhsim03G0225000' => 'rsi', 'Rhsim03G0225100' => 'rsi', 'Rhsim03G0225200' => 'rsi', 'Rhsim03G0225300' => 'rsi', 'Rhsim07G0174500' => 'rsi', 'Rhsim08G0063000' => 'rsi', 'Sabra01G0099500' => 'sbr', 'Sabra02G0178200' => 'sbr', 'Sabra03G0071500' => 'sbr', 'Sabra04G0010500' => 'sbr', 'Sabra04G0010600' => 'sbr', 'Sabra05G0065300' => 'sbr', 'Sabra07G0072400' => 'sbr', 'Sabra07G0072500' => 'sbr', 'Sabra07G0072600' => 'sbr', 'Sabra08G0017100' => 'sbr', 'Sabra08G0017200' => 'sbr', 'Sabra08G0074900' => 'sbr', 'Sabra13G0065700' => 'sbr', 'Sabra17G0119800' => 'sbr', 'Sabra17G0119900' => 'sbr', 'SalBow1G1051' => 'sbo', 'SalBow2G1440' => 'sbo', 'SalBow4G1504' => 'sbo', 'SalBow6G1244' => 'sbo', 'Sc05g0009050' => 'sci', 'Sc19g0000080' => 'sci', 'Sc19g0000130' => 'sci', 'Sc20g0001260' => 'sci', 'Sc20g0001270' => 'sci', 'Sc20g0001280' => 'sci', 'Sc25g0001150' => 'sci', 'Sed0001507' => 'sed', 'Sed0001855' => 'sed', 'Sed0008544' => 'sed', 'Sed0009284' => 'sed', 'Sed0014397' => 'sed', 'Sed0015978' => 'sed', 'Sed0016195' => 'sed', 'Sed0025845' => 'sed', 'Sed0027369' => 'sed', 'SEGI_02485' => 'sgi', 'SEGI_04716' => 'sgi', 'SEGI_05565' => 'sgi', 'SEGI_10452' => 'sgi', 'SEGI_18973' => 'sgi', 'SEGI_19963' => 'sgi', 'SEGI_20791' => 'sgi', 'SEGI_21179' => 'sgi', 'SEGI_24816' => 'sgi', 'SEGI_28210' => 'sgi', 'SEGI_28794' => 'sgi', 'SEGI_36175' => 'sgi', 'SGA_v2.0_scaffold13G06473' => 'sas', 'SGA_v2.0_scaffold13G06490' => 'sas', 'SGA_v2.0_scaffold89G27456' => 'sas', 'SGA_v2.0_scaffold90G27725' => 'sas', 'SHI02174' => 'shi', 'SMO115G0080' => 'smo', 'SMO115G0145' => 'smo', 'SMO356G0747' => 'smo', 'Solyc02g080330.4' => 'sly', 'Solyc03g096980.1' => 'sly', 'Solyc03g096990.4' => 'sly', 'Solyc04g010320.1' => 'sly', 'Solyc05g055400.4' => 'sly', 'Solyc06g074180.3' => 'sly', 'Solyc11g007540.2' => 'sly', 'Sopen02g025030' => 'spe', 'Sopen03g027720' => 'spe', 'Sopen03g027730' => 'spe', 'Sopen03g027740' => 'spe', 'Sopen04g005500' => 'spe', 'Sopen05g033840' => 'spe', 'Sopen06g030600' => 'spe', 'Sopen11g003380' => 'spe', 'Sp1g10230' => 'spa', 'Sp3g02470' => 'spa', 'Sp3g08850' => 'spa', 'Sp3g08860' => 'spa', 'Sp5g19200' => 'spa', 'Sp6g38150' => 'spa', 'TAR016G0001' => 'tar', 'TAR284G0003' => 'tar', 'TAR362G0756' => 'tar', 'TAR369G0104' => 'tar', 'TAR375G0930' => 'tar', 'TAR376G0354' => 'tar', 'TAR376G1162' => 'tar', 'TAR623G1483' => 'tar', 'TAR627G0704' => 'tar', 'TAR633G0801' => 'tar', 'THA.LOC104802993' => 'tha', 'THA.LOC104805720' => 'tha', 'THA.LOC104805722' => 'tha', 'THA.LOC104805987' => 'tha', 'THA.LOC104823189' => 'tha', 'THA.LOC104823523' => 'tha', 'THA.LOC104823794' => 'tha', 'THA.LOC104827239' => 'tha', 'Thecc.05G208800' => 'tca', 'Thecc.05G224200' => 'tca', 'Thecc.05G224400' => 'tca', 'Thecc.05G224800' => 'tca', 'Thecc.05G225600' => 'tca', 'Thecc.05G225700' => 'tca', 'Thecc.05G225900' => 'tca', 'Thecc.05G226000' => 'tca', 'Thecc.05G226100' => 'tca', 'Thecc.05G226300' => 'tca', 'Thecc.05G226500' => 'tca', 'Thecc.06G217100' => 'tca', 'Thecc.10G110500' => 'tca', 'Thhalv10000475m.g' => 'esa', 'Thhalv10002491m.g' => 'esa', 'Thhalv10007399m.g' => 'esa', 'Thhalv10016078m.g' => 'esa', 'Thhalv10019548m.g' => 'esa', 'Thhalv10020529m.g' => 'esa', 'Thhalv10022031m.g' => 'esa', 'Thhalv10022173m.g' => 'esa', 'TPR.G12035' => 'tpr', 'TPR.G16627' => 'tpr', 'TPR.G17276' => 'tpr', 'TPR.G2557' => 'tpr', 'TPR.G32636' => 'tpr', 'TPR.G32641' => 'tpr', 'TPR.G32647' => 'tpr', 'TPR.G32667' => 'tpr', 'TPR.G33069' => 'tpr', 'TPR.G39525' => 'tpr', 'TPR.G4401' => 'tpr', 'TPR.G8939' => 'tpr', 'TWI32G0346' => 'twi', 'TWI32G0798' => 'twi', 'TWI32G0913' => 'twi', 'TWI38G1909' => 'twi', 'TWI38G2235' => 'twi', 'TWI60G0066' => 'twi', 'TWI60G0716' => 'twi', 'TWI60G1135' => 'twi', 'TWI60G1276' => 'twi', 'TWI60G1307' => 'twi', 'TWI60G1357' => 'twi', 'TWI60G1529' => 'twi', 'TWI60G1674' => 'twi', 'TWI63G0541' => 'twi', 'TWI63G1512' => 'twi', 'unitig_37.g12334' => 'ugi', 'unitig_46.g18616' => 'ugi', 'unitig_61.g26116' => 'ugi', 'unitig_62.g23835' => 'ugi', 'unitig_749.g14011' => 'ugi', 'vmacro06359' => 'vma', 'vmacro06360' => 'vma', 'vmacro06361' => 'vma', 'vmacro06362' => 'vma', 'vmacro06363' => 'vma', 'vmacro06364' => 'vma', 'vmacro06365' => 'vma', 'vmacro06366' => 'vma', 'vmacro06367' => 'vma', 'vmacro07225' => 'vma', 'vmacro15818' => 'vma', 'VMungo0251G0382' => 'vmu', 'VMungo0251G3706' => 'vmu', 'VMungo0720G2560' => 'vmu', 'VMungo1127G1932' => 'vmu', 'VMungo1215G0736' => 'vmu', 'VMungo1215G3081' => 'vmu', 'Zm00001eb043620' => 'zma', 'Zm00001eb043630' => 'zma', 'Zm00001eb082030' => 'zma', 'Zm00001eb084190' => 'zma', 'Zm00001eb107450' => 'zma', 'Zm00001eb124640' => 'zma', 'Zm00001eb124650' => 'zma', 'Zm00001eb124660' => 'zma', 'Zm00001eb172800' => 'zma', 'Zm00001eb172950' => 'zma', 'Zm00001eb173980' => 'zma', 'Zm00001eb224350' => 'zma', 'Zm00001eb225160' => 'zma', 'Zm00001eb229580' => 'zma', 'Zm00001eb260750' => 'zma', 'Zm00001eb363650' => 'zma', 'Zm00001eb404760' => 'zma', 'Zm00001eb404780' => 'zma', 'Zm00001eb433380' => 'zma' ) $gf_id = 'HOM05D000507' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000507' ) $data_identifier = 'HOM05D000507' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 18, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 6, 'amhyb' => (int) 6, 'aly' => (int) 10, 'aox' => (int) 5, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 7, 'cqu' => (int) 12, 'bca' => (int) 21, 'bol' => (int) 10, 'bra' => (int) 8, 'can' => (int) 15, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 8, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 23, 'ccl' => (int) 15, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 12, 'cpa' => (int) 3, 'csa' => (int) 13, 'camsi' => (int) 9, 'dca' => (int) 10, 'din' => (int) 3, 'dzi' => (int) 14, 'eca' => (int) 10, 'bvu' => (int) 10, 'egr' => (int) 31, 'fan' => (int) 43, 'fve' => (int) 12, 'gma' => (int) 12, 'ghi' => (int) 24, 'gra' => (int) 13, 'vvi' => (int) 14, 'han' => (int) 12, 'cav' => (int) 13, 'hma' => (int) 3, 'vpl' => (int) 8, 'sun' => (int) 1, 'lal' => (int) 21, 'lja' => (int) 6, 'lonja' => (int) 19, 'lsa' => (int) 13, 'mes' => (int) 11, 'mpo' => (int) 4, 'mbi' => (int) 16, 'mdo' => (int) 12, 'mtr' => (int) 14, 'cme' => (int) 35, 'egut' => (int) 3, 'ama' => (int) 1, 'nta' => (int) 20, 'nnu' => (int) 22, 'oeu' => (int) 7, 'osa' => (int) 22, 'pax' => (int) 9, 'pgr' => (int) 9, 'stu' => (int) 14, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 7, 'pso' => (int) 18, 'qlo' => (int) 11, 'rch' => (int) 13, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 12, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 3, 'sly' => (int) 7, 'spe' => (int) 8, 'spa' => (int) 6, 'tar' => (int) 10, 'tha' => (int) 8, 'tca' => (int) 13, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 15, 'ugi' => (int) 5, 'vma' => (int) 11, 'vmu' => (int) 6, 'zma' => (int) 19 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb433380' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1